1 code implementation • 6 Dec 2022 • Tristan Lazard, Marvin Lerousseau, Etienne Decencière, Thomas Walter
Whole slide images (WSI) are microscopy images of stained tissue slides routinely prepared for diagnosis and treatment selection in medical practice.
no code implementations • 23 Nov 2021 • Théo Estienne, Maria Vakalopoulou, Enzo Battistella, Theophraste Henry, Marvin Lerousseau, Amaury Leroy, Nikos Paragios, Eric Deutsch
Deep learning overtook this limitation by taking advantage of GPU calculation and the learning process.
no code implementations • 23 Jul 2021 • Théo Estienne, Maria Vakalopoulou, Stergios Christodoulidis, Enzo Battistella, Théophraste Henry, Marvin Lerousseau, Amaury Leroy, Guillaume Chassagnon, Marie-Pierre Revel, Nikos Paragios, Eric Deutsch
Explainability of deep neural networks is one of the most challenging and interesting problems in the field.
no code implementations • MICCAI Workshop COMPAY 2021 • Amaury Leroy, Kumar Shreshtha, Marvin Lerousseau, Théophraste Henry, Théo Estienne, Marion Classe, Nikos Paragios, Vincent Grégoire, Eric Deutsch
The pathological analysis of biopsy specimens is essential to cancer diagnosis, treatment selection and prognosis.
no code implementations • 10 May 2021 • Marvin Lerousseau, Marion Classe, Enzo Battistella, Théo Estienne, Théophraste Henry, Amaury Leroy, Roger Sun, Maria Vakalopoulou, Jean-Yves Scoazec, Eric Deutsch, Nikos Paragios
The vast majority of semantic segmentation approaches rely on pixel-level annotations that are tedious and time consuming to obtain and suffer from significant inter and intra-expert variability.
1 code implementation • MICCAI Workshop COMPAY 2021 • Marvin Lerousseau, Maria Vakalopoulou, Eric Deutsch, Nikos Paragios
Multiple instance learning (MIL) is the preferred approach for whole slide image classification.
1 code implementation • 6 Apr 2021 • Marvin Lerousseau
This report summarizes work performed as part of an internship at INRIA, in partial requirement for the completion of a master degree in math and informatics.
no code implementations • 11 Feb 2021 • Enzo Battistella, Maria Vakalopoulou, Roger Sun, Théo Estienne, Marvin Lerousseau, Sergey Nikolaev, Emilie Alvarez Andres, Alexandre Carré, Stéphane Niyoteka, Charlotte Robert, Nikos Paragios, Eric Deutsch
Precision medicine is a paradigm shift in healthcare relying heavily on genomics data.
1 code implementation • 30 Oct 2020 • Theophraste Henry, Alexandre Carre, Marvin Lerousseau, Theo Estienne, Charlotte Robert, Nikos Paragios, Eric Deutsch
Brain tumor segmentation is a critical task for patient's disease management.
2 code implementations • 21 Oct 2020 • Théo Estienne, Maria Vakalopoulou, Enzo Battistella, Alexandre Carré, Théophraste Henry, Marvin Lerousseau, Charlotte Robert, Nikos Paragios, Eric Deutsch
Image registration is one of the most challenging problems in medical image analysis.
no code implementations • 3 Sep 2020 • Marvin Lerousseau, Eric Deutsh, Nikos Paragios
validation) balanced-accuracy, kappa and f1 of 0. 913, 0. 897 and 0. 951 (resp.
1 code implementation • 10 Apr 2020 • Marvin Lerousseau, Maria Vakalopoulou, Marion Classe, Julien Adam, Enzo Battistella, Alexandre Carré, Théo Estienne, Théophraste Henry, Eric Deutsch, Nikos Paragios
In this paper, we propose a weakly supervised framework for whole slide imaging segmentation that relies on standard clinical annotations, available in most medical systems.
1 code implementation • 20 Mar 2020 • Théo Estienne, Marvin Lerousseau, Maria Vakalopoulou, Emilie Alvarez Andres, Enzo Battistella, Alexandre Carré, Siddhartha Chandra, Stergios Christodoulidis, Mihir Sahasrabudhe, Roger Sun, Charlotte Robert, Hugues Talbot, Nikos Paragios, Eric Deutsch
Image registration and segmentation are the two most studied problems in medical image analysis.
no code implementations • 5 Dec 2019 • Antoine Marot, Benjamin Donnot, Camilo Romero, Luca Veyrin-Forrer, Marvin Lerousseau, Balthazar Donon, Isabelle Guyon
For power grid operations, a large body of research focuses on using generation redispatching, load shedding or demand side management flexibilities.
1 code implementation • 10 Oct 2019 • Théo Estienne, Maria Vakalopoulou, Stergios Christodoulidis, Enzo Battistella, Marvin Lerousseau, Alexandre Carre, Guillaume Klausner, Roger Sun, Charlotte Robert, Stavroula Mougiakakou, Nikos Paragios, Eric Deutsch
We evaluated the proposed architecture using the publicly available OASIS 3 dataset, measuring the dice coefficient metric for both registration and segmentation tasks.