Search Results for author: Yinjun Jia

Found 5 papers, 1 papers with code

Full-Atom Peptide Design with Geometric Latent Diffusion

no code implementations21 Feb 2024 Xiangzhe Kong, Yinjun Jia, Wenbing Huang, Yang Liu

Peptide design plays a pivotal role in therapeutics, allowing brand new possibility to leverage target binding sites that are previously undruggable.

ProFSA: Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment

no code implementations11 Oct 2023 Bowen Gao, Yinjun Jia, Yuanle Mo, Yuyan Ni, WeiYing Ma, ZhiMing Ma, Yanyan Lan

Pocket representations play a vital role in various biomedical applications, such as druggability estimation, ligand affinity prediction, and de novo drug design.

DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening

1 code implementation10 Oct 2023 Bowen Gao, Bo Qiang, Haichuan Tan, Minsi Ren, Yinjun Jia, Minsi Lu, Jingjing Liu, WeiYing Ma, Yanyan Lan

Virtual screening, which identifies potential drugs from vast compound databases to bind with a particular protein pocket, is a critical step in AI-assisted drug discovery.

Contrastive Learning Data Augmentation +3

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