Search Results for author: Alexander Whatley

Found 2 papers, 1 papers with code

Improving RNA Secondary Structure Design using Deep Reinforcement Learning

no code implementations5 Nov 2021 Alexander Whatley, Zhekun Luo, Xiangru Tang

Rising costs in recent years of developing new drugs and treatments have led to extensive research in optimization techniques in biomolecular design.

reinforcement-learning Reinforcement Learning (RL)

AdaLead: A simple and robust adaptive greedy search algorithm for sequence design

1 code implementation5 Oct 2020 Sam Sinai, Richard Wang, Alexander Whatley, Stewart Slocum, Elina Locane, Eric D. Kelsic

In this work, we implement an open-source Fitness Landscape EXploration Sandbox (FLEXS: github. com/samsinai/FLEXS) environment to test and evaluate these algorithms based on their optimality, consistency, and robustness.

Bayesian Optimization

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