no code implementations • 19 Apr 2023 • Giuseppe de Vito, Lapo Turrini, Chiara Fornetto, Elena Trabalzini, Pietro Ricci, Duccio Fanelli, Francesco Vanzi, Francesco Saverio Pavone
Our data show that brain-wide nonlinear light-sheet imaging represents a useful tool to investigate circadian rhythm effects on neuronal activity.
2 code implementations • 15 Nov 2022 • Robin Gutzen, Giulia De Bonis, Chiara De Luca, Elena Pastorelli, Cristiano Capone, Anna Letizia Allegra Mascaro, Francesco Resta, Arnau Manasanch, Francesco Saverio Pavone, Maria V. Sanchez-Vives, Maurizio Mattia, Sonja Grün, Pier Stanislao Paolucci, Michael Denker
Neuroscience is moving towards a more integrative discipline, where understanding brain function requires consolidating the accumulated evidence seen across experiments, species, and measurement techniques.
no code implementations • 17 Dec 2020 • Giuseppe de Vito, Lapo Turrini, Caroline Müllenbroich, Pietro Ricci, Giuseppe Sancataldo, Giacomo Mazzamuto, Natascia Tiso, Leonardo Sacconi, Duccio Fanelli, Ludovico Silvestri, Francesco Vanzi, Francesco Saverio Pavone
Light-sheet fluorescence microscopy (LSFM) enables real-time whole-brain functional imaging in zebrafish larvae.
no code implementations • 31 Aug 2020 • Filippo Maria Castelli, Matteo Roffilli, Giacomo Mazzamuto, Irene Costantini, Ludovico Silvestri, Francesco Saverio Pavone
Semantic segmentation of neuronal structures in 3D high-resolution fluorescence microscopy imaging of the human brain cortex can take advantage of bidimensional CNNs, which yield good results in neuron localization but lead to inaccurate surface reconstruction.
1 code implementation • 28 Nov 2018 • Marco Celotto, Chiara De Luca, Paolo Muratore, Francesco Resta, Anna Letizia Allegra Mascaro, Francesco Saverio Pavone, Giulia De Bonis, Pier Stanislao Paolucci
Here we combined wide-field fluorescence microscopy and a transgenic mouse model expressing a calcium indicator (GCaMP6f) in excitatory neurons to study SW propagation over the meso-scale under ketamine anesthesia.
1 code implementation • 4 Nov 2015 • Marco Paciscopi, Ludovico Silvestri, Francesco Saverio Pavone, Paolo Frasconi
We present a scalable method for brain cell identification in multiview confocal light sheet microscopy images.