no code implementations • 4 Jan 2024 • Ecem Sogancioglu, Bram van Ginneken, Finn Behrendt, Marcel Bengs, Alexander Schlaefer, Miron Radu, Di Xu, Ke Sheng, Fabien Scalzo, Eric Marcus, Samuele Papa, Jonas Teuwen, Ernst Th. Scholten, Steven Schalekamp, Nils Hendrix, Colin Jacobs, Ward Hendrix, Clara I Sánchez, Keelin Murphy
To address this, we organized a public research challenge, NODE21, aimed at the detection and generation of lung nodules in chest X-rays.
1 code implementation • Nature Scientific Reports 2023 • Finn Behrendt, Marcel Bengs, Debayan Bhattacharya, Julia Krüger, Roland Opfer, Alexander Schlaefer
We illustrate how this analysis and a combination of multiple architectures results in state-of-the-art performance for lung nodule detection, which is demonstrated by the proposed model winning the detection track of the Node21 competition.
no code implementations • 5 Sep 2022 • Debayan Bhattacharya, Benjamin Tobias Becker, Finn Behrendt, Marcel Bengs, Dirk Beyersdorff, Dennis Eggert, Elina Petersen, Florian Jansen, Marvin Petersen, Bastian Cheng, Christian Betz, Alexander Schlaefer, Anna Sophie Hoffmann
Particularly, we use a supervised contrastive loss that encourages embeddings of maxillary sinus volumes with and without anomaly to form two distinct clusters while the cross-entropy loss encourages the 3D CNN to maintain its discriminative ability.
no code implementations • 12 Apr 2022 • Finn Behrendt, Marcel Bengs, Frederik Rogge, Julia Krüger, Roland Opfer, Alexander Schlaefer
Overall, we highlight the importance of clean data sets for UAD in brain MRI and demonstrate an approach for detecting falsely labeled data directly during training.
no code implementations • 11 Apr 2022 • Maximilian Neidhardt, Marcel Bengs, Sarah Latus, Stefan Gerlach, Christian J. Cyron, Johanna Sprenger, Alexander Schlaefer
The results show that our approach can estimate elastic properties on a pixelwise basis with a mean absolute error of 5. 01+-4. 37 kPa.
no code implementations • 31 Jan 2022 • Marcel Bengs, Finn Behrendt, Max-Heinrich Laves, Julia Krüger, Roland Opfer, Alexander Schlaefer
We analyze the value of age information during training, as an additional anomaly score, and systematically study several architecture concepts.
no code implementations • 14 Sep 2021 • Marcel Bengs, Satish Pant, Michael Bockmayr, Ulrich Schüller, Alexander Schlaefer
Our top-performing method achieves the AUC-ROC value of 90. 90\% compared to 84. 53\% using the previous approach with smaller input tiles.
no code implementations • 14 Sep 2021 • Marcel Bengs, Finn Behrendt, Julia Krüger, Roland Opfer, Alexander Schlaefer
These methods rely on healthy brain MRIs and eliminate the requirement of pixel-wise annotated data compared to supervised deep learning.
no code implementations • 10 Sep 2021 • Marcel Bengs, Michael Bockmayr, Ulrich Schüller, Alexander Schlaefer
In this work, we propose an end-to-end MB tumor classification and explore transfer learning with various input sizes and matching network dimensions.
no code implementations • 2 Jul 2020 • Marcel Bengs, Nils Gessert, Wiebke Laffers, Dennis Eggert, Stephan Westermann, Nina A. Mueller, Andreas O. H. Gerstner, Christian Betz, Alexander Schlaefer
We analyze the value of using multiple hyperspectral bands compared to conventional RGB images and we study several machine learning models' ability to make use of the additional spectral information.
no code implementations • 2 Jul 2020 • Marcel Bengs, Nils Gessert, Alexander Schlaefer
Tracking and localizing objects is a central problem in computer-assisted surgery.
1 code implementation • 20 May 2020 • Nils Gessert, Marcel Bengs, Matthias Schlüter, Alexander Schlaefer
Moreover, optical coherence tomography (OCT) and deep learning have been used for estimating forces based on deformation observed in volumetric image data.
no code implementations • 21 Apr 2020 • Marcel Bengs, Nils Gessert, Matthias Schlüter, Alexander Schlaefer
For this purpose, we design and evaluate several 3D and 4D deep learning methods and we propose a new deep learning approach.
no code implementations • MIDL 2019 • Marcel Bengs, Nils Gessert, Alexander Schlaefer
We propose 4D spatio-temporal deep learning for end-to-end motion forecasting and estimation using a stream of OCT volumes.
no code implementations • 21 Apr 2020 • Marcel Bengs, Stephan Westermann, Nils Gessert, Dennis Eggert, Andreas O. H. Gerstner, Nina A. Mueller, Christian Betz, Wiebke Laffers, Alexander Schlaefer
A recent study has shown that hyperspectral imaging (HSI) can be used for non-invasive detection of head and neck tumors, as precancerous or cancerous lesions show specific spectral signatures that distinguish them from healthy tissue.
no code implementations • 21 Apr 2020 • Marcel Bengs, Nils Gessert, Alexander Schlaefer
Autism spectrum disorder (ASD) is associated with behavioral and communication problems.
no code implementations • 20 Apr 2020 • Nils Gessert, Marcel Bengs, Julia Krüger, Roland Opfer, Ann-Christin Ostwaldt, Praveena Manogaran, Sven Schippling, Alexander Schlaefer
While deep learning methods for single-scan lesion segmentation are common, deep learning approaches for lesion activity have only been proposed recently.
no code implementations • MIDL 2019 • Nils Gessert, Marcel Bengs, Julia Krüger, Roland Opfer, Ann-Christin Ostwaldt, Praveena Manogaran, Sven Schippling, Alexander Schlaefer
While deep learning methods for single-scan lesion segmentation are common, deep learning approaches for lesion activity have only been proposed recently.
no code implementations • 6 Nov 2019 • Nils Gessert, Marcel Bengs, Alexander Schlaefer
As a result, we propose a recurrent model with state-max-pooling which automatically learns the relevance of different EIS measurements.
no code implementations • 12 Aug 2019 • Nils Gessert, Martin Gromniak, Marcel Bengs, Lars Matthäus, Alexander Schlaefer
To overcome the time-consuming data annotation, we generate a large number of ground-truth labels using a robotic setup.
no code implementations • 20 May 2019 • Nils Gessert, Marcel Bengs, Lukas Wittig, Daniel Drömann, Tobias Keck, Alexander Schlaefer, David B. Ellebrecht
For feedback during interventions, real-time in-vivo imaging with confocal laser microscopy has been proposed for differentiation of benign and malignant tissue by manual expert evaluation.