1 code implementation • 19 Apr 2024 • Marek Wodzinski, Niccolò Marini, Manfredo Atzori, Henning Müller
DeeperHistReg is a software framework dedicated to registering whole slide images (WSIs) acquired using multiple stains.
no code implementations • 19 Apr 2024 • Marek Wodzinski, Niccolò Marini, Manfredo Atzori, Henning Müller
The proposed method does not require any fine-tuning to a particular dataset and can be used directly for any desired tissue type and stain.
1 code implementation • 29 May 2023 • Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen
The alignment of tissue between histopathological whole-slide-images (WSI) is crucial for research and clinical applications.
1 code implementation • 29 Aug 2022 • Mara Graziani, Niccolò Marini, Nicolas Deutschmann, Nikita Janakarajan, Henning Müller, María Rodríguez Martínez
Interpretability of deep learning is widely used to evaluate the reliability of medical imaging models and reduce the risks of inaccurate patient recommendations.
no code implementations • MICCAI Workshop COMPAY 2021 • Niccolò Marini, Sebastian Otálora, Francesco Ciompi, Gianmaria Silvello, Stefano Marchesin, Simona Vatrano, Gianziana Buttafuoco, Manfredo Atzori, Henning Müller
Global annotations refer to global findings in the high-resolution image and do not include information about the location of the regions of interest or the magnification levels used to identify a finding.