1 code implementation • 8 Jan 2019 • Da Ma, Manuel J. Cardoso, Maria A. Zuluaga, Marc Modat, Nick. Powell, Frances Wiseman, Victor Tybulewicz, Elizabeth Fisher, Mark. F. Lythgoe, Sebastien Ourselin
In this work, we introduce a framework to extract the Purkinje layer within the grey matter, enabling the estimation of the thickness of the cerebellar grey matter, the granular layer and molecular layer from gadolinium-enhanced ex vivo mouse brain MRI.
1 code implementation • 27 Jan 2014 • Da Ma, Manuel J. Cardoso, Marc Modat, Nick Powell, Jack Wells, Holly Holmes, Frances Wiseman, Victor Tybulewicz, Elizabeth Fisher, Mark F. Lythgoe, Sébastien Ourselin
The segmentation accuracy of the multi-atlas framework was evaluated using publicly available mouse brain atlas databases with pre-segmented manually labelled anatomical structures as the gold standard, and optimised parameters were obtained for the STEPS algorithm in the label fusion to achieve the best segmentation accuracy.