1 code implementation • 15 May 2024 • Benjamin Teo, Paul Bastide, Cécile Ané
We show that a vast array of models for trait evolution along phylogenetic networks can be reformulated as graphical models, for which efficient belief propagation algorithms exist.
no code implementations • 18 Feb 2024 • John A. Rhodes, Hector Banos, Jingcheng Xu, Cécile Ané
We consider the identifiability of the circular order in which subnetworks attach to a blob, first proving that this order is well-defined for outer-labeled planar blobs.
no code implementations • 22 Oct 2021 • Jingcheng Xu, Cécile Ané
We propose the "distance split tree", which can be constructed from pairwise distances, and prove that it is a refinement of the network's tree of blobs, capturing the tree-like features of the network.
